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16:24
YouTube
Sanbomics
Single-cell trajectory and pseudotime analysis with Monocle3 and Seurat in R
In this video I perform trajectory analysis in R on a large dataset of cells undergoing dedifferentiation into iPSCs. I use Seurat to load, merge, and preprocess the data. I use Monocle3 to calculate pseudotime and create the trajectories. I go over basic analyses and plotting using Monocle3. Notebook: https://github.com/mousepixels/sanbomics ...
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Jan 12, 2023
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